Systems Biology Modelling and Analysis 1st Edition

Systems Biology Modelling and Analysis 1st Edition – Ebook Instant Download/Delivery ISBN(s): 9781119716532,1119716535,9781119716587

Product details:

• ISBN 13: 9781119716587
• Author:Elisabetta De Maria

Systems Biology Modelling and Analysis provides an overview of state-of-the-art techniques and introduces related tools and practices to formalize models and automate reasoning for systems biology. The authors present and compare the main formal methods used in systems biology for modelling biological networks, including discussion of their advantages, drawbacks, and main applications.

Each chapter includes an intuitive presentation of the specific formalism, a brief history of the formalism and of its applications in systems biology, a formal description of the formalism and its variants, at least one realistic case study, some applications of formal techniques to validate and make deep analysis of models encoded with the formalism, and a discussion on the kind of biological systems for which the formalism is suited, along with concrete ideas on its possible evolution.

Table contents:

Chapter 1 Introduction

Chapter 2 Petri Nets for Systems Biology Modelling and Analysis

Chapter 3 Process Algebras in Systems Biology

Chapter 4 The Rule‐Based Model Approach: A Kappa Model for Hepatic Stellate Cells Activation by TGFB1

Chapter 5 Pathway Logic: Curation and Analysis of Experiment‐Based Signaling Response Networks

Chapter 6 Boolean Networks and Their Dynamics: The Impact of Updates

Chapter 7 Analyzing Long‐Term Dynamics of Biological Networks With Answer Set Programming

Chapter 8 Hybrid Automata in Systems Biology

Chapter 9 Kalle Parvinen: Ordinary Differential Equations

Chapter 10 Network Modelling Methods for Precision Medicine

Chapter 11 Conclusion

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